PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G268900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 448aa    MW: 49914.2 Da    PI: 5.2869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G268900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-053363731254
                        HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Aqcoe4G268900.1.p 336 RKEKLGDRITALQQLVSPF-----GKTDTASVLFEAIEYIKFL 373
                        677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.668324373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-6334377No hitNo description
SuperFamilySSF474593.14E-10334383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0038335379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-8338377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MADEFQIGIS NGNWWSSSAR NTSTPCSTTL SSEVGNYGWS QEMEMKARSC EDSCNSMVYQ  60
DTTTQRPQES DSSTLQMMGY SLSSPIMDWN QALLNRSSTR SSELNLSNML QEEVISSSSF  120
QQQSGMDSSH AQKDWSPRNY SDGGEESSIS SFKQINPVFG LDSSKNSGDC IVTCQGLHMN  180
YPIISTSTTL LPGLFEPDLQ SQQSPYCMMN NYSSPMNYHM DLNELSPSFP QFNKTSSQKP  240
QSNTTNQLHF SNNTHFWNPS ADTMSDVRSS YSVSPQSQFL TSTTIKEKRN CSNMSAGKMN  300
DEEVRDTSSV AKKTSEPTFK RPRIETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA  360
SVLFEAIEYI KFLHEQVGQV LSTPYMKNGA PATQYQQKSD KSKDTEALKQ IDLRSRGLCL  420
VPISSTFPVT NETTADFWTP TFGGSYR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267864.11e-168PREDICTED: transcription factor bHLH112-like
TrEMBLD7SSM51e-163D7SSM5_VITVI; Putative uncharacterized protein
STRINGVIT_00s0274g00070.t011e-162(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.11e-64bHLH family protein